PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g822130.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 454aa MW: 50387.4 Da PI: 7.0611

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g822130.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.9	3.6e-08	263	304	8	54
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+ri+++ + Lr l+Pk + K++ +i AveYI +L Pd.00g822130.m01 263 AERNRRSRIKDGHFALRALVPKiS------KMDIPAIIGDAVEYIEEL 304 7*******************66......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MRNLEGVAES LRPLVESKQW DYCVVWKLGD DPSRFIEMMG CCCGGGYEYD CVNVKEEEGE 60 PHSAKLCRDG FLKHPIRTKA CEALAQLPSS MPLYSGIHTE VIISAQPRWL SDHVNASGSN 120 PLQSHDFVGT RVLIPVLSDL IELFSTKNVS LNEFHVDPLP EECPEKLLPS LNLANFIPGP 180 QVFPSSVSQT TSCPILEGSS SGSNPSSEHP LLSSRSRKSR RGDNLLQQQA GLASGSGTVV 240 EKHMAKVTRK TGSGQYQSKN LFAERNRRSR IKDGHFALRA LVPKISKMDI PAIIGDAVEY 300 IEELKKKVKE LEDELREIEE EEDLTKNKAD VKILASDMRK EGSICLISTE HKQGSSSFVQ 360 KSPTAVQVEV NQIGKRDCLI KLFYEQSRGG FASLMENMDS LGLQVVDANV TTFDGNVLNI 420 LKVQANRDIQ AKKLRDKLIR LTRETNQTVH KGIN

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MRNLEGVAES LRPLVESKQW DYCVVWKLGD DPSRFIEMMG CCCGGGYEYD CVNVKEEEGE  60
PHSAKLCRDG FLKHPIRTKA CEALAQLPSS MPLYSGIHTE VIISAQPRWL SDHVNASGSN  120
PLQSHDFVGT RVLIPVLSDL IELFSTKNVS LNEFHVDPLP EECPEKLLPS LNLANFIPGP  180
QVFPSSVSQT TSCPILEGSS SGSNPSSEHP LLSSRSRKSR RGDNLLQQQA GLASGSGTVV  240
EKHMAKVTRK TGSGQYQSKN LFAERNRRSR IKDGHFALRA LVPKISKMDI PAIIGDAVEY  300
IEELKKKVKE LEDELREIEE EEDLTKNKAD VKILASDMRK EGSICLISTE HKQGSSSFVQ  360
KSPTAVQVEV NQIGKRDCLI KLFYEQSRGG FASLMENMDS LGLQVVDANV TTFDGNVLNI  420
LKVQANRDIQ AKKLRDKLIR LTRETNQTVH KGIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	4e-35	bHLH family protein