PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g821620.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 882aa MW: 98655.9 Da PI: 10.2312

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g821620.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	59.4	7e-19	745	781	2	37
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEE CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkk 37 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+ Pd.00g821620.m01 745 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQ 781 7***********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 882 aa Download sequence
MASSHSVLLS SPPPTAKDGS RFIDSNYLQK QSHVPANFKW PEEDAVSAQE ELNAPVVDLE 60 GFFNGDVVAT ENAAKLIRSS CLRHGFFQVT NHRVDADLIQ LAYDHVDDFF NLPIEEKIKV 120 QRRPGSPYGY SGAHMDRFSS NLPWKETFSF AFQNGPEKTV ADYFKFTISK DFEQTGLVYQ 180 KYSEAMHSLS LSIMELLAIG LGVDRMLYRE FFEDAVSIMR TNLYPTCQEP NLSLGTGPHC 240 DPNALTILHQ DLVGGLDVFV DNKWHKVRPV LGALVINIGD VFAYLCSIKS LVLQYVKPKR 300 LSGLSPSRRD GSNPSGIGRL RSSLVLQYVK PKRLSGLSPS RRDGSNPSGI GRLRSSFVLQ 360 YVKHKRLSGL SPSRRDGSNP SGIGRLRSSF ILQYVKPKRL SGLSPSRRDG SNPSGIGRLR 420 SSLVLQCVKP KRLSGLSPSR RDGSNPSGWG LTLDSNSFGF FLNKPLVAIK LDHHQNNSKR 480 SNFFGGERMF PGIEFPVKLG GRKDQLAAPQ PSIHDNNNRV VADEVDFFSD RKNKHNTTTT 540 DDHHQDMKSN GTISVKKENW TGLGVNTGLH LVTANTGSDQ SMVDDGISSD VDNKRAKNHE 600 LAQLQVELQR MNSENLRLKE MLGQNVKAKS DQEKKQVLVP RQFLNLGPRA TAETDDQVSN 660 SSSEAKTRSA LPQNINEAAS SKDHHLKKKM IIRLVHWIPK TPIISGMAPK LNNSAANKPI 720 DQSTEATMRK ARVSVRARSE APMITDGCQW RKYGQKMAKG NPCPRAYYRC TMAVGCPVRK 780 QALSNGIYRS CLHRAAVNSH KERRSLVFFM CPRADKVVKP AEELVRKSEG GTRKFPDFTW 840 SDLLEFTQNH YRVNETTLEN FTDWFLSADR SNFKPTHFKT SH

Sequence ? help Back to Top

Protein Sequence Length: 882 aa Download sequence

MASSHSVLLS SPPPTAKDGS RFIDSNYLQK QSHVPANFKW PEEDAVSAQE ELNAPVVDLE  60
GFFNGDVVAT ENAAKLIRSS CLRHGFFQVT NHRVDADLIQ LAYDHVDDFF NLPIEEKIKV  120
QRRPGSPYGY SGAHMDRFSS NLPWKETFSF AFQNGPEKTV ADYFKFTISK DFEQTGLVYQ  180
KYSEAMHSLS LSIMELLAIG LGVDRMLYRE FFEDAVSIMR TNLYPTCQEP NLSLGTGPHC  240
DPNALTILHQ DLVGGLDVFV DNKWHKVRPV LGALVINIGD VFAYLCSIKS LVLQYVKPKR  300
LSGLSPSRRD GSNPSGIGRL RSSLVLQYVK PKRLSGLSPS RRDGSNPSGI GRLRSSFVLQ  360
YVKHKRLSGL SPSRRDGSNP SGIGRLRSSF ILQYVKPKRL SGLSPSRRDG SNPSGIGRLR  420
SSLVLQCVKP KRLSGLSPSR RDGSNPSGWG LTLDSNSFGF FLNKPLVAIK LDHHQNNSKR  480
SNFFGGERMF PGIEFPVKLG GRKDQLAAPQ PSIHDNNNRV VADEVDFFSD RKNKHNTTTT  540
DDHHQDMKSN GTISVKKENW TGLGVNTGLH LVTANTGSDQ SMVDDGISSD VDNKRAKNHE  600
LAQLQVELQR MNSENLRLKE MLGQNVKAKS DQEKKQVLVP RQFLNLGPRA TAETDDQVSN  660
SSSEAKTRSA LPQNINEAAS SKDHHLKKKM IIRLVHWIPK TPIISGMAPK LNNSAANKPI  720
DQSTEATMRK ARVSVRARSE APMITDGCQW RKYGQKMAKG NPCPRAYYRC TMAVGCPVRK  780
QALSNGIYRS CLHRAAVNSH KERRSLVFFM CPRADKVVKP AEELVRKSEG GTRKFPDFTW  840
SDLLEFTQNH YRVNETTLEN FTDWFLSADR SNFKPTHFKT SH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	7e-69	WRKY family protein