PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g821240.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 354aa MW: 40187.1 Da PI: 4.3322

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g821240.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.8e-12	188	231	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L Pd.00g821240.m01 188 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 231 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MELSEHSFLE ELLALRRDST WETIPTEMNE FLSSSGSWGN FGYLDQNPPT FFPNSSCTQE 60 FSPPFEPNLS NCYNNNNTTF NEVYYPLGFG AGEDGLSAQQ QLTDSSYNTL DTPPFPVQED 120 NPWSMLEEEE LGLLGDEIHN LETQAEAACK MEPIQSPDQV PVFNMGMCEE RNNRGNSKKL 180 QGQPSKNLMA ERRRRKRLND RLSMLRSIVP KISKMDRTSI LGDTIDYMKE LLERINKLQQ 240 EIETDADQLN VMSLFKDVKP NEMLVRNSPK FDVQRRNVDT RIDICCAGKP GLLLSTVSTL 300 EALGLEIQQC VISCFNDFAM QASCSEDFDQ RTTVTSEEIK QALFRNAGYG GRCL

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MELSEHSFLE ELLALRRDST WETIPTEMNE FLSSSGSWGN FGYLDQNPPT FFPNSSCTQE  60
FSPPFEPNLS NCYNNNNTTF NEVYYPLGFG AGEDGLSAQQ QLTDSSYNTL DTPPFPVQED  120
NPWSMLEEEE LGLLGDEIHN LETQAEAACK MEPIQSPDQV PVFNMGMCEE RNNRGNSKKL  180
QGQPSKNLMA ERRRRKRLND RLSMLRSIVP KISKMDRTSI LGDTIDYMKE LLERINKLQQ  240
EIETDADQLN VMSLFKDVKP NEMLVRNSPK FDVQRRNVDT RIDICCAGKP GLLLSTVSTL  300
EALGLEIQQC VISCFNDFAM QASCSEDFDQ RTTVTSEEIK QALFRNAGYG GRCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	191	198	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	1e-89	bHLH family protein