PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g820730.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 201aa MW: 22279.2 Da PI: 6.3945 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.6e-18 | 16 | 65 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+Wv+eIr+p gk++r++lg++ e+Aa+a++aa++ l+g Pd.00g820730.m01 16 RYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEEQEMAAAAYDAAALHLRG 65 69****999.**********8...557*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 201 aa Download sequence |
MEPPAADCHH LPSSARYRGV RKRKWGKWVS EIREPGKKTR IWLGSYEEQE MAAAAYDAAA 60 LHLRGRGAVL NFPELVDSLP RPASSSPMDV QLAAQEAALR VRRLRMGAVS TEAAGGSSSP 120 RGRGLSSMPV TVGLSPSQIQ AINESPLDSP KLWMQYMYRA HCHEGLSLLG DDMSCVEYHD 180 EEVELGECEN MQHLSIWDSY L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G33760.1 | 3e-49 | ERF family protein |