PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g817210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 430aa    MW: 47662.2 Da    PI: 9.0784
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g817210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.59.1e-19102135134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C+ C+tt+TplWR gp g++tLCnaCG++yrk++
  Pd.00g817210.m01 102 CTDCHTTTTPLWRGGPAGPRTLCNACGIKYRKRK 135
                       ********************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MLKEKERLFH WICKFAGRKK VGMLFLSLPP PPPAVFLGYT LPPGHPCNLF TLPPPPADKK  60
RTGPRPCPVC YLPVEEAIAL MPKGSEAEHM NQSSIAPPSK SCTDCHTTTT PLWRGGPAGP  120
RTLCNACGIK YRKRKRALVG LNKGATGTER RKHKTIGAPL KLGLKSMERE MVEMVNQSQS  180
LRPGHASAMA SRPADPALHA GDCEADPVVT TGDPQATENV AEEKPAFDEQ QRQVDKPPSS  240
WGKGKGTGTE PVSPPNKPSY PNASFPRLEK TDVTLQPDPS DHPINYTQKR RASQYATAAT  300
GLSLENFDLE KVSCVGLDGT PWPRDKENEE HKTDRDREDE REYYKHHKAL PLSEIEFADT  360
RKPITRVMHG TAAVSEYGAG RDVIRWRPEQ LDTAEEALRR AARIWKENAM RGDPDAPHSR  420
VLRALRGESF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-16GATA family protein