PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g816880.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 328aa MW: 36025.9 Da PI: 5.289 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.9 | 2.9e-19 | 78 | 126 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f t+eeAa+a+++ ++k++g Pd.00g816880.m01 78 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTPEEAARAYDREARKIRG 126 9*******.**********954...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MCGGAILADL IPRNRGLRVT ASDIWPNSPF AKLDPDNFFD SNPSSLTRTD SSPRKRAQPT 60 SGNRQEEKPP KRARKNLYRG IRQRPWGKWA AEIRDPRKGV RVWLGTFNTP EEAARAYDRE 120 ARKIRGKKAK VNFPNEDDDI PTQTYLRNPN PNPPPLFQTS SENLSNSHMP KSFDLGFGYD 180 LNQIATISSN SNSNSNSKGL SSMNLVSTDP TVISGQANSG SGSDGAYSST SGLLGCNQNG 240 SSCCCGEAEV KEVEETKEGI LNKDAIAMME ENEVQKLSEE LMAYENMMKF YQIPYLDGQS 300 TATQHPPAQE GGMVGDLWSF DDDGASAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 8e-34 | ERF family protein |