PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g814050.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 1064aa MW: 115195 Da PI: 7.3749

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g814050.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.8	2.9e-30	341	399	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Pd.00g814050.m01 341 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 399 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1064 aa Download sequence
MDKGWGLTLD SDSFGFFLNK PPAAVKLDHH QNNSKRSNFF GGERMFPGIE FPVKLGGRED 60 QLAAPQPSIH DNNNRVVVDE VDFFSDRKNK HNTTTTDDHH QDMKSNSTIS VKKENWTGLD 120 VNTGLHLVTA NTGSDQSMVD DGISSDVDNK RAKNHELAQL QVELQRMNSE NLRLKEMLGQ 180 VTNNYSALQM HVASQLNHEQ NVEAKSDQEK KQGLVPRQFL DLGPRATAET DDQVSNSSSE 240 ARTRSASPQN INEAASSKDH HLKKNDHPIG PLDPENSNNF RDGKRVGREE SPESESQGWV 300 PNKAPKLNNS AANKPIDQST EATMRKARVS VRARSEAPMI TDGCQWRKYG QKMAKGNPCP 360 RAYYRCTMAV GCPVRKQVQR CAEDRTILIT TYEGNHNHPL PPAAMAMAST TTAAASMLLS 420 GSMSSADGIM NPNNLLARAI LPCSSSVATI SASAPFPTVT LDLTTTPLQF QRPQSQFQVP 480 FPGQQPQLPQ SASFADTVSA ATAAITADPT FTAALAAAIT SIIGGAPVAR LDAAAIRIKN 540 LLFVFAGYGT VNFLSLALFL FFCCEPATIK PVNMGTIFKA VVLPLFLSSL LLSLVSSAPN 600 DGLFRIGLKK VKLDPNNRVA AQLESKNVEA LRASMRKYHL PANLEDSGGI DIVSLKNYLD 660 AQYYGEIAIG TPPQTFTVIF DTGSANLWVP SSKCRFSVAC YFHANYKSGK SSTYKKNGTS 720 ASIQYGTGAI SGFYSNDNVQ VGDIVVENQD FIEATSEPGL IFLAAKFDGL LGLGFQEISV 780 GKAVPVWYNM IEQGLIKKPL FSFWLNRNAQ EEEGGEIVFG GVDPNHFKGK HTYVPVTKKG 840 YWQFDMGDVR IGGKPTGYCS RGCFAVADSG TSLLAGPTTV ITMINQAIGA EGVVSQECKA 900 VAQQYGQTIM NLLLAEARPD KVCSQIGLCT FDGTRSVSMG IESVVDKSNG KSSGILHDAS 960 CSACEMALCE RMPSPMGQSA VDCGRLSSMP SVSFTIGGKV FKLTPNEYIL KVGEGPQAQC 1020 ISGFTNIDIP PPRGPLWILG DIFMGRYHTV FDSGNMRVGF AEAA

Sequence ? help Back to Top

Protein Sequence Length: 1064 aa Download sequence

MDKGWGLTLD SDSFGFFLNK PPAAVKLDHH QNNSKRSNFF GGERMFPGIE FPVKLGGRED  60
QLAAPQPSIH DNNNRVVVDE VDFFSDRKNK HNTTTTDDHH QDMKSNSTIS VKKENWTGLD  120
VNTGLHLVTA NTGSDQSMVD DGISSDVDNK RAKNHELAQL QVELQRMNSE NLRLKEMLGQ  180
VTNNYSALQM HVASQLNHEQ NVEAKSDQEK KQGLVPRQFL DLGPRATAET DDQVSNSSSE  240
ARTRSASPQN INEAASSKDH HLKKNDHPIG PLDPENSNNF RDGKRVGREE SPESESQGWV  300
PNKAPKLNNS AANKPIDQST EATMRKARVS VRARSEAPMI TDGCQWRKYG QKMAKGNPCP  360
RAYYRCTMAV GCPVRKQVQR CAEDRTILIT TYEGNHNHPL PPAAMAMAST TTAAASMLLS  420
GSMSSADGIM NPNNLLARAI LPCSSSVATI SASAPFPTVT LDLTTTPLQF QRPQSQFQVP  480
FPGQQPQLPQ SASFADTVSA ATAAITADPT FTAALAAAIT SIIGGAPVAR LDAAAIRIKN  540
LLFVFAGYGT VNFLSLALFL FFCCEPATIK PVNMGTIFKA VVLPLFLSSL LLSLVSSAPN  600
DGLFRIGLKK VKLDPNNRVA AQLESKNVEA LRASMRKYHL PANLEDSGGI DIVSLKNYLD  660
AQYYGEIAIG TPPQTFTVIF DTGSANLWVP SSKCRFSVAC YFHANYKSGK SSTYKKNGTS  720
ASIQYGTGAI SGFYSNDNVQ VGDIVVENQD FIEATSEPGL IFLAAKFDGL LGLGFQEISV  780
GKAVPVWYNM IEQGLIKKPL FSFWLNRNAQ EEEGGEIVFG GVDPNHFKGK HTYVPVTKKG  840
YWQFDMGDVR IGGKPTGYCS RGCFAVADSG TSLLAGPTTV ITMINQAIGA EGVVSQECKA  900
VAQQYGQTIM NLLLAEARPD KVCSQIGLCT FDGTRSVSMG IESVVDKSNG KSSGILHDAS  960
CSACEMALCE RMPSPMGQSA VDCGRLSSMP SVSFTIGGKV FKLTPNEYIL KVGEGPQAQC  1020
ISGFTNIDIP PPRGPLWILG DIFMGRYHTV FDSGNMRVGF AEAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-111	WRKY family protein