PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g810770.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 231aa MW: 26168.3 Da PI: 8.9645 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.9 | 5.4e-14 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l d+++ +G+g W+++ + g++R +k+c++rw +yl Pd.00g810770.m01 9 KGLWTVEEDRILMDYIRVHGKGKWNRVNKVTGLKRGGKSCRLRWMNYL 56 678*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 60 | 5e-19 | 62 | 107 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eEd+l+++++++lG++ W++Ia +++ gRt++q+k++w+++l Pd.00g810770.m01 62 RGDFSEEEDDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 107 899*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MEGGNEYKKG LWTVEEDRIL MDYIRVHGKG KWNRVNKVTG LKRGGKSCRL RWMNYLSPSV 60 KRGDFSEEED DLIIRLHNLL GNRWSLIAGR VPGRTDNQVK NHWNTHLSKK LGVNSKKGKA 120 KAKTSLGSEQ VKGSFCTASE SNSEQQPQPN SNSNIGDHEA ASAAGFDDKL MMIKDNIGSK 180 SGVGFSGMWE AMMNNNNYDS SFWFYNDDLN LNSPYYLLDP SLDDHHYPLQ F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 6e-69 | MYB family protein |