PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g806940.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 23610.2 Da PI: 8.078 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.5 | 8e-19 | 110 | 159 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrdp +ng +r +lg++ tae+Aa a+++a+ k++g Pd.00g806940.m01 110 YRGVRQRP-WGKYAAEIRDPAKNG--ARMWLGTYETAEDAALAYDRAAFKIRG 159 9*******.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MLGDKKSSLE SDFALLETIH QHLLDDNYFH GTLMANLSPN IPPAVEDLGK LSIVVPGESS 60 ESSSWSPPNQ NGVAEPAPAA WADTTEVKDN VQPKLAARET HAPPRGRQNY RGVRQRPWGK 120 YAAEIRDPAK NGARMWLGTY ETAEDAALAY DRAAFKIRGS KALLNFPHLI GSADDACDRG 180 RVTSTRRYRE CCDSLASSSD GGSPKRRRSS GVGSVGSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 6e-30 | ERF family protein |