PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g806900.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 24520.2 Da PI: 5.6248 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.3 | 5.7e-16 | 105 | 158 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtae...eAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ t+e +A a+++a+ k++g Pd.00g806900.m01 105 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETPEdaeDAGLAYDRAAFKIRG 158 7********.***********9987..**********9866688889****999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MYGETTLELE SNLALLESIR HHLLDDLEPQ ATSFSGNNVP TFPFFLTENW WESSLEAECA 60 DNTMQDMLEA LHDVNYVGCV VSNDEVQLKE QVAEGAVHAP REERHYRGVR RRPWGKFAAE 120 IRDPAKNGAR VWLGTYETPE DAEDAGLAYD RAAFKIRGCK AKLNFPHLIG SSNVEPVRVT 180 PKRRRSPDQC SSSSSSAYTS DNGSSKPKRR AAGVDNHLAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 182 | 208 | KRRRSPDQCSSSSSSAYTSDNGSSKPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 4e-36 | ERF family protein |