PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g806310.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 316aa MW: 35161.1 Da PI: 8.7921 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.9 | 4.3e-14 | 116 | 167 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P + + ++ + a+i+ A+e++k+L+ Pd.00g806310.m01 116 QRMTHIAVERNRRKQMNEHLAILRSLMPDS---YVQRGDQASIVGGAIEFVKELE 167 79****************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MTMALEALTS NEPFNFIIYD TISATPYSFQ DSSGTTSNFI PPDKYFCTST SSMKSDQDTQ 60 IKRALNLEAA AAGGGGRQKQ SSLGVNNNNA QQQQQGRKKR RRKPRVCKNK EEAETQRMTH 120 IAVERNRRKQ MNEHLAILRS LMPDSYVQRG DQASIVGGAI EFVKELEHLL HSLEAQKLQL 180 LHNADVSTST STSKVVQTPF AQLLECPQYT WSHCPNKFTS KTKAAVADIE VTLIETHANL 240 KIMSRRISPR QLSKLVGGIQ SLQLTILHLT VTTMDPFVLY SISVKIEEGC LLSSVDDIAT 300 AIHHMLRVIE EAAALC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 103 | RKKRRRK |
2 | 97 | 104 | RKKRRRKP |
3 | 98 | 103 | KKRRRK |
4 | 117 | 128 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 4e-68 | bHLH family protein |