PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g806050.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 517aa MW: 56235.3 Da PI: 4.3847

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g806050.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.9	2.6e-36	41	132	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll Pd.00g806050.m01 41 FLSKTYDMVDDPATDQVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLL 124 9******************999*************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k Pd.00g806050.m01 125 KSINRRKP 132 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MGGANNNGDD ASMAGGGGGA QQVGLAPAPA PLLNSNAPPP FLSKTYDMVD DPATDQVVSW 60 SPTNNSFVVW NPPEFARDLL PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGQ 120 KHLLKSINRR KPAHGHSHQQ PQPSQGQNSV AACVEVGKFG LEEEVERLKR DKNVLMQELI 180 KLRQQQQSTD NQLQAMVQRL QGMEQRQQQM MSFLAKAVQS PSFLTQFVQQ QNESNRRIIE 240 VNKKRRLKQD EGGDSGTPDG QIVKYQPPVN EAAKAMLRQI MTTDTSSSRL ESFNDTHDNN 300 LTGNVSSSSS SLIDSGSSSS RASGVTLQEV PLTSGLGSSS AISEVQSSLQ AANSGTVTRA 360 PFSDLNALVG AQEAQSIPIS QAGVIIPELS QIPEMVPECL VDIPEENMAP DAGVGFIENM 420 ASDAGDGFIS DILGLDGSMT IDIDSIPPDP DIEALLKNWD QFLQSPEPDE MDSTSAEGVP 480 MGNEEQPSTE NGWDKTQHNM DNLTEKMGRL TSDTEGV

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MGGANNNGDD ASMAGGGGGA QQVGLAPAPA PLLNSNAPPP FLSKTYDMVD DPATDQVVSW  60
SPTNNSFVVW NPPEFARDLL PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGQ  120
KHLLKSINRR KPAHGHSHQQ PQPSQGQNSV AACVEVGKFG LEEEVERLKR DKNVLMQELI  180
KLRQQQQSTD NQLQAMVQRL QGMEQRQQQM MSFLAKAVQS PSFLTQFVQQ QNESNRRIIE  240
VNKKRRLKQD EGGDSGTPDG QIVKYQPPVN EAAKAMLRQI MTTDTSSSRL ESFNDTHDNN  300
LTGNVSSSSS SLIDSGSSSS RASGVTLQEV PLTSGLGSSS AISEVQSSLQ AANSGTVTRA  360
PFSDLNALVG AQEAQSIPIS QAGVIIPELS QIPEMVPECL VDIPEENMAP DAGVGFIENM  420
ASDAGDGFIS DILGLDGSMT IDIDSIPPDP DIEALLKNWD QFLQSPEPDE MDSTSAEGVP  480
MGNEEQPSTE NGWDKTQHNM DNLTEKMGRL TSDTEGV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	242	249	NKKRRLKQ
2	243	248	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-132	HSF family protein