PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g803250.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 626aa MW: 69842.8 Da PI: 10.4188

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g803250.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.9	1.3e-09	11	62	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.........TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.........kgRtlkqcksrwq 45 +W t E++llv+av+++G++ W+++a +++ + +t+ +c++++ Pd.00g803250.m01 11 PWGTLEELLLVCAVNRHGTKGWDSVAMEVQtkssstfasTLLTAQDCRDKFD 62 7**********************************99999***99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MAREHGTSGH PWGTLEELLL VCAVNRHGTK GWDSVAMEVQ TKSSSTFAST LLTAQDCRDK 60 FDDLKRRFVS KNDSQSHSLG QMVDELRNLR VDELRHEVHR RDVSIVSLEL KVKRLEEERE 120 RSLKEEAEAH PNNDLQSGGE DQLEASPENI AGETNSGEDF DSDERENRSF NESNSTSQRG 180 EAKENSVEDN KKGGETVGAT QLGESNEFWE SVSESKREGK RGGVASKQNS DVQSSASLSK 240 RKRQAEGDEV SPATSKGVKP KLVKHEPLIK VLRIIRSHRL GSVFERRLRS QESERYKSLI 300 RQHMDLHEVQ SRLNKGVYTD CTHKFFRDLL LLFNNAVVFL RKTSPEHMAA QELRSIVLKE 360 MKDQLQKPQP AIDTVKLHAP KLESKVPKIE PDSSVKPSKP SVIACGLRRS ANGGGGAKNR 420 KGDKKERGEV EEKGKVSEVE DKGIRKKRTQ ERGGRRGSRR DSSKNVGKTE HAYGGNELSS 480 HDGLEEMKME KIENAKMTKQ GAARTFLKRM KQNSTSIEVK RGTSDVSVGG ESEDSMVEED 540 EKKQKGKTKP DERKKRVTRS STGRRGGRGG GRRDEESSGR AKRGVGRPPK RPETAEAGNG 600 SGKRGRGNGE ADQMGSAGRP RKRTRR

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MAREHGTSGH PWGTLEELLL VCAVNRHGTK GWDSVAMEVQ TKSSSTFAST LLTAQDCRDK  60
FDDLKRRFVS KNDSQSHSLG QMVDELRNLR VDELRHEVHR RDVSIVSLEL KVKRLEEERE  120
RSLKEEAEAH PNNDLQSGGE DQLEASPENI AGETNSGEDF DSDERENRSF NESNSTSQRG  180
EAKENSVEDN KKGGETVGAT QLGESNEFWE SVSESKREGK RGGVASKQNS DVQSSASLSK  240
RKRQAEGDEV SPATSKGVKP KLVKHEPLIK VLRIIRSHRL GSVFERRLRS QESERYKSLI  300
RQHMDLHEVQ SRLNKGVYTD CTHKFFRDLL LLFNNAVVFL RKTSPEHMAA QELRSIVLKE  360
MKDQLQKPQP AIDTVKLHAP KLESKVPKIE PDSSVKPSKP SVIACGLRRS ANGGGGAKNR  420
KGDKKERGEV EEKGKVSEVE DKGIRKKRTQ ERGGRRGSRR DSSKNVGKTE HAYGGNELSS  480
HDGLEEMKME KIENAKMTKQ GAARTFLKRM KQNSTSIEVK RGTSDVSVGG ESEDSMVEED  540
EKKQKGKTKP DERKKRVTRS STGRRGGRGG GRRDEESSGR AKRGVGRPPK RPETAEAGNG  600
SGKRGRGNGE ADQMGSAGRP RKRTRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	543	555	KQKGKTKPDERKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	9e-44	MYB_related family protein