PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g800450.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 391aa    MW: 43289.3 Da    PI: 7.017
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g800450.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.23e-08229270854
                       HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       +Er+RR+ri+++ + Lr l+Pk +      K++  +i   AveYI +L
  Pd.00g800450.m01 229 AERNRRSRIKDGHFALRALVPKiS------KMDIPAIIGDAVEYIEEL 270
                       7*********************66......***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MRNLEGVAES LRPLVESKQW DYCVVWKLGD DPSRFIEMMG CCCGGGYEYD CVNVKEEEGE  60
PHSAKLCRDG FLKHPIRTKA CEALAQLPSS MPLYSGIHTE VIISAQPRWL SDHVNASGSN  120
PSQSHVEECP EKLLPSLNLA NFIPGPQVFP SSVSQTTSCP ILEGSSSGSN PSSEHPLLSS  180
RSRKSRRGDN LLQQQAGLAS GSGTVVEKHM AKVTRKTGSG QYQSKNLFAE RNRRSRIKDG  240
HFALRALVPK ISKMDIPAII GDAVEYIEEL KKKVKELEDE LREIEEEEDL TKNKAHVKIL  300
ASDMRKEGSI CLISTEHKPS SFVQKSPTAV QVEVNQIGKR DCLIKLFYEQ SRGGFASLME  360
NMDSLGLQVV DANVTTFDGN VLNILKVQVR F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10610.13e-30bHLH family protein