PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g800380.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 227aa MW: 25669.9 Da PI: 6.6556 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.5 | 7.1e-14 | 9 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqkyl 48 +g WT+eEd l+d+v+ +G+g+W++I++ g R +k+c++rw +yl Pd.00g800380.m01 9 KGLWTKEEDTVLLDYVTVHGSGRWNRIPKLTGktlstlctCLRNGKSCRLRWINYL 64 678***********************************9966************97 PP | |||||||
2 | Myb_DNA-binding | 55.7 | 1.1e-17 | 70 | 113 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE++l+++++++lG++ W++Ia +++ gRt++q+k++w++ Pd.00g800380.m01 70 RGDFSEEEEDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNYWNT 113 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 227 aa Download sequence |
MEAENEYKKG LWTKEEDTVL LDYVTVHGSG RWNRIPKLTG KTLSTLCTCL RNGKSCRLRW 60 INYLSPNVKR GDFSEEEEDL IIRLHNLLGN RWSLIAGRVP GRTDNQVKNY WNTRLCKKLG 120 FKKQTPKALA SSSETPKAPD SNSKQSCSCG TSSTVKDMEA LQNDQNPLLD DIVAAEDSNS 180 NEEIQWMTEH CAGSLSCSNG HNLISWGMLE FLQGHPLELL YQNFELS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G14750.1 | 4e-61 | MYB family protein |