PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g799470.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 338aa    MW: 36738 Da    PI: 6.084
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g799470.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.44.8e-19253287135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+ kTp+WR gp+g ktLCnaCG++y++ +l
  Pd.00g799470.m01 253 CSHCGVQKTPQWRTGPNGAKTLCNACGVRYKSGRL 287
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MECVEAALKT SIRKEMAVKA SPQAVFDDLL WGGVNGQNGV ACDDFSVDDL LDFSNEDGFV  60
ETEAEEDDKD KVKGFASVSP PKQPQDPDNS DFSEKNELGP EPTSELSVPA DDLENLEWLS  120
HFVEDSFTEF TTSLPAGFIP EKPKTEKRPD LAAPLPEKPC FKTPVPAKAR SKRTRTGGRV  180
WSLGSPSLTE TSSSSSSSSS SSSPSSPWLI YPTTQNREPA EAGGEPVGSV EKPPKKPKRR  240
LVDGSSSQPP RRCSHCGVQK TPQWRTGPNG AKTLCNACGV RYKSGRLLPE YRPACSPTFS  300
SELHSNHHRK VLEMRKKKDV TGVPEPGLTR PPVVPSFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1234240PKKPKRR
2234241PKKPKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.21e-86GATA family protein