PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g794680.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 309aa    MW: 34574.6 Da    PI: 9.5965
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g794680.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.11.3e-104796246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
   Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                      ++WT+eE+  l+ +v ++G g W+tI            R+  ++k++w++
  Pd.00g794680.m01 47 QKWTAEEEAALKAGVLKHGAGKWRTILTDPEfnsilHLRSNVDLKDKWRN 96
                      79**********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MSGTRHQTDA FPKEAVAVIK ISSSRLATQS ERLGYELAKC LGVRIPQKWT AEEEAALKAG  60
VLKHGAGKWR TILTDPEFNS ILHLRSNVDL KDKWRNINVT AIWGSRQKAK LALKRNLPNP  120
KHDNNPLAVS TVIQSHEEIV DAKPLAISGG KLQTTESKQP IARLDHLILK AITNLKELGG  180
SDRASIAMYI EKQLGIINCN QKDEFDRTGI EPSPIDCFKK FHISKGKNGE GENWPSEKAK  240
ELYEKMENKK VVVEQENLDV NDWDIYREVI APSHGRVLGL GCGVKAKDAY YSSTVISVDA  300
WNWKKIMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.11e-50MYB_related family protein