PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g794620.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 246aa MW: 28830.4 Da PI: 8.3655 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.3 | 4.7e-15 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed+ll ++++++G g W+ ++ + g++R++ +c++rw++yl Pd.00g794620.m01 10 KGAWTRKEDDLLRQCIEKHGEGKWHQVPYKAGLNRCRRSCRLRWLNYL 57 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.9 | 6.5e-15 | 63 | 106 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg + ++E +l+++++k+lG++ W++Iar+++ gRt++++k++w++ Pd.00g794620.m01 63 RGDFMEDEVDLIIRLHKLLGNR-WSLIARRLP-GRTANDVKNYWNT 106 678889****************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MEGYNLGVRK GAWTRKEDDL LRQCIEKHGE GKWHQVPYKA GLNRCRRSCR LRWLNYLKPN 60 IKRGDFMEDE VDLIIRLHKL LGNRWSLIAR RLPGRTANDV KNYWNTRSRK DYCMKKMKDK 120 SQETIKTIIR PQPRSFTKSS NCLSFKEPIL DHTQLEEDFS TPSQTSTSTR IGSDWWETFL 180 DDKDATERAT GSGLGLDEEL LASFWVDDDM PQSTRTCVNA SEEGLSRGDF SFSVDLWDHS 240 NEEWRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 6e-65 | MYB family protein |