PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g789470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 568aa MW: 64578.5 Da PI: 5.8265

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g789470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100	2.4e-31	81	168	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s ++s+r+g+i++r+ vCs+eg+r++ ++ +++r+r++tr+gCka+++vkk+++g+w v+kl++eHnHel+p Pd.00g789470.m01 81 FYNSYARRIGFSTRVSVYQRSRRDGSIICRQVVCSREGFRRDGGEN--RSKRQRTVTRVGCKAQMTVKKQSSGRWAVSKLVKEHNHELVP 168 9***************************************9988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MDFEPLNIEN EAVEFDMGGS GEDDATGLDL EHPDDSYDIF DDDLVQSSNS TRSRDDLACG 60 DPNLEPYEGM EFDSEQASRI FYNSYARRIG FSTRVSVYQR SRRDGSIICR QVVCSREGFR 120 RDGGENRSKR QRTVTRVGCK AQMTVKKQSS GRWAVSKLVK EHNHELVPPD KVHCLRSHRH 180 VSGPARSLID TLQAAGMGPS GVMSVLIKES GGINNVGFTK VDCQNYMSSS RQRTLGSGDQ 240 DRIIRAAVRQ VFPGTRHRFC KWNVLREAQE KLSDIYHSHP TFEAEFQRCI NMTETIDEFE 300 SCWESLLQRY DIGDNEWLQS MYDARQQWVP VFLRDTFFGE MSVTQGSDNI NSYFDGYINA 360 STNIQVLIKQ YEKAIATRHE KEVKADYDTM NISPILRTPS PMEKQAAKLY TRVVFMKFQE 420 ELVETLAYPA TMVDDTGSET LYRVAKFGED HKVYFVREAI KYVEEGAESV RVYNVAMDAL 480 HEAASEVTAA KKHGLGVVQS TSINCSQQLQ SCTVDQDKKI KELAAELDIA SQQCEAYRAK 540 LLAILKDMEE QKLKISVNVR NVRLNLRS

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MDFEPLNIEN EAVEFDMGGS GEDDATGLDL EHPDDSYDIF DDDLVQSSNS TRSRDDLACG  60
DPNLEPYEGM EFDSEQASRI FYNSYARRIG FSTRVSVYQR SRRDGSIICR QVVCSREGFR  120
RDGGENRSKR QRTVTRVGCK AQMTVKKQSS GRWAVSKLVK EHNHELVPPD KVHCLRSHRH  180
VSGPARSLID TLQAAGMGPS GVMSVLIKES GGINNVGFTK VDCQNYMSSS RQRTLGSGDQ  240
DRIIRAAVRQ VFPGTRHRFC KWNVLREAQE KLSDIYHSHP TFEAEFQRCI NMTETIDEFE  300
SCWESLLQRY DIGDNEWLQS MYDARQQWVP VFLRDTFFGE MSVTQGSDNI NSYFDGYINA  360
STNIQVLIKQ YEKAIATRHE KEVKADYDTM NISPILRTPS PMEKQAAKLY TRVVFMKFQE  420
ELVETLAYPA TMVDDTGSET LYRVAKFGED HKVYFVREAI KYVEEGAESV RVYNVAMDAL  480
HEAASEVTAA KKHGLGVVQS TSINCSQQLQ SCTVDQDKKI KELAAELDIA SQQCEAYRAK  540
LLAILKDMEE QKLKISVNVR NVRLNLRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-98	FAR1 family protein