PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g788320.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 195aa MW: 21803.8 Da PI: 7.6094 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39 | 1.4e-12 | 2 | 50 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i A++++k+L+ Pd.00g788320.m01 2 THIVVERNRRKQMNEYLAVLRSLMPQS---YAQRGDQASIIGGAINFVKELE 50 899************************...*******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MTHIVVERNR RKQMNEYLAV LRSLMPQSYA QRGDQASIIG GAINFVKELE QLLQSMDSNK 60 RSKQQPLAEF FTFPQFSTRA TQSNNNSAGV QANEPNMAQS NSNQWAAADI EVTMVDSHAN 120 LKILSEKRPR QLLKMVAGFQ SLRLSVLHLN VTTVDEMVLY SVSVKIEEGC LLNTVDEIAA 180 AVNQMLRTIQ EGGFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 5e-77 | bHLH family protein |