PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g787610.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 238aa MW: 26182.5 Da PI: 8.3746 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.5 | 5.8e-14 | 47 | 93 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ ++ +Ka+ L ++v+++++L Pd.00g787610.m01 47 KSHKEAERRRRQRINTHLSTLRTLLPNT-----TRTDKASLLAEVVQHVREL 93 79*************************9.....8***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MLPFLSWSDQ NHYAHDPSLV NLMDGADSIL SPAASMTETS RSAEASKSHK EAERRRRQRI 60 NTHLSTLRTL LPNTTRTDKA SLLAEVVQHV RELRRQAADL ARQDGGSCCG GTTGSEPWPF 120 PGELDEATVS YCDGEARLLK ATLCCEDRPG LNRDLIQAIR SVRARAIRAE MMTVGGRTKN 180 VVVMQWAGGG GEEEVRALKR ALKAVVENRA SCSGPGRLVL GNKRARVYGS VYEDENEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56770.1 | 3e-24 | bHLH family protein |