PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g786180.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 257aa MW: 28801.2 Da PI: 6.5038 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.9 | 9.8e-08 | 17 | 41 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++I ++++ +Rt++++k++w+++l Pd.00g786180.m01 17 SWSAITAHLP-KRTDNEVKNYWHSHL 41 7*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MYRHEVEYGF LSLGLWSWSA ITAHLPKRTD NEVKNYWHSH LKKRLALKGY DPVTHKLKTT 60 IFGFANGSTD DPKTDANLNH IAQWESARLQ AEARFVKDSE LHKQAYHPYN NNDISAASSI 120 LLGHNKDFGP TDQLFGQNAP QRLDILRAWE SILMSNYSKA AGGQDHVNSF GNHLAGDFEP 180 PIISAISNNG SSLMDCFVHE PVGQCFDENY CSSITEPFAT VHHNMGFKNN GACLEDFGLW 240 EIIMQGKKDC PISGISM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 2e-29 | MYB family protein |