PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g785840.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 243aa MW: 27002.3 Da PI: 6.8383 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.6 | 5.8e-08 | 5 | 26 | 24 | 46 |
HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46 W++Ia++++ +Rt++++k++w++ Pd.00g785840.m01 5 WSAIAAHLP-KRTDNEVKNYWHS 26 *********.***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MFGMWSAIAA HLPKRTDNEV KNYWHSRLKK LLALKGYDPV THKPKTTIFG FANGSTDDPK 60 TGSNLNHIAQ WESARLQAEA RFVRDLELHK QAHHPYNNND ICAASTILLG HNKDFGPTDQ 120 LFGQNGPQCL DILRAWESIL MSNYSKAARG QDHVNSLGNG LAGEFEPSIV SAISSNGSSL 180 MDYFFHEPVG QCFDENHGTN ITEPFSAVHH NMGFKNGACL EDFGLWEIVM RGRKDCPVSG 240 ISM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 4e-27 | MYB family protein |