PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g783490.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 171aa    MW: 19806.5 Da    PI: 4.75
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g783490.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.41.4e-0969116454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       a+  rE+ RR+r+N++f eL  +l +    + +K +K +iL  A++ + +L
  Pd.00g783490.m01  69 AKACREKLRRERLNDRFVELSAVLEPG---RPPKSDKPAILDDAIRVLTQL 116
                       6778**********************8...89**************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MYSLMEEWIE YLDYIEETTQ PSDFLWPNDT PSFREFEFSA VDVPAAFSPE KECPRKRGRT  60
DSSCSGSGAK ACREKLRRER LNDRFVELSA VLEPGRPPKS DKPAILDDAI RVLTQLRAEA  120
QELKETNEKL LEEVKSLKAE KNELREEKLV LKADKERLEK QLKGLLLNFD L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15460PRKRGRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.22e-44bHLH family protein