PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g783020.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 176aa    MW: 19236.4 Da    PI: 5.2679
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g783020.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-19110159355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +g+++AeIrdp +ng   r +lg++ tae+Aa a+++a+ k++g
  Pd.00g783020.m01 110 YRGVRQRP-WGKYAAEIRDPAKNG--SRMWLGTYETAEDAALAYDRAAFKIRG 159
                       9*******.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MLGDEKSSLE SDFALLETIH QHLLDDNYFH GTLMASLSPN IPPAVEDLGK LSIVVPGESS  60
ESSSWSPPNQ NGVAEPAPAT WADTTEVKDN VQPKLAAREI HAPPRGRQNY RGVRQRPWGK  120
YAAEIRDPAK NGSRMWLGTY ETAEDAALAY DRAAFKIRGS KALLNFPHLI GSADDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-29ERF family protein