PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g783000.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 26392.2 Da PI: 5.1774 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.8 | 6.5e-19 | 95 | 145 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrdp++ng +r++lg++ tae+A a+++a+ k++g Pd.00g783000.m01 95 HFRGVRRRP-WGKYAAEIRDPKKNG--ARVWLGTYETAEDAGLAYDRAAFKMRG 145 69*******.***********9998..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MSTESITSSN WALLESIRQH LLDDDFETQA TFLASVAEDD APLYDCAPST SSSSHAHFGV 60 EGWGDTIAIL DHDLDRPDDV KVEALVNQAP PRGRHFRGVR RRPWGKYAAE IRDPKKNGAR 120 VWLGTYETAE DAGLAYDRAA FKMRGSKAKL NFPHLIGSHD SEPGRVAPKR GSPEPSFSSA 180 TSSDDGGSPT LKRRKSGVDS AAKAKLEEAA EQFHVFQVDS LTLGGQLFVD ELYTYDELLG 240 I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 9e-33 | ERF family protein |