PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g782370.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1105aa MW: 123071 Da PI: 6.2105

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g782370.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.6	6.7e-55	124	238	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e ++rwlk+ e++ iL+n+ek++l+ e++++p+sgsl+L+n++++r+fr+DG++w+kkkdg+tv E+he+LKvg+ e+l+cyYah+e+np+f Pd.00g782370.m01 124 QEaQTRWLKPAEVLYILQNHEKFKLAPEPPQQPSSGSLFLFNKRVLRFFRRDGHHWRKKKDGRTVGEAHERLKVGNAETLNCYYAHGEDNPNF 216 5669*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhyle 116 qrr+yw+L+ ++e+ivlvhy+e Pd.00g782370.m01 217 QRRSYWMLDPAYEHIVLVHYRE 238 ******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1105 aa Download sequence
MTKTTLPSTV GRNLVPTYPS IPLLRGICRG CSGLSIILGK YTISGLDIGT HDSRPPKLLQ 60 APSSKLQPYT PRTTGSPVIR FSVVLVDANE HKSNAFSAVR GQVLIFRQSL NMMQSGYNIN 120 DLFQEAQTRW LKPAEVLYIL QNHEKFKLAP EPPQQPSSGS LFLFNKRVLR FFRRDGHHWR 180 KKKDGRTVGE AHERLKVGNA ETLNCYYAHG EDNPNFQRRS YWMLDPAYEH IVLVHYREIS 240 EGKSSTGTFA QSPVSSSSFS PSPSDKTTQN RGSTSMISDL REPYQNLSSP GSIEVNSDVA 300 IKKNGRENPD KLYGTGESDS SAKFDVSQAL RQLEEQLSLN EDSFNEFVDD NPNSDIMDRF 360 NEFLDDTNGS DILEDHSDMT NQDQFTAFHG PEYVVHDQFY GGRAQMQGNA NNSDEHSQFI 420 GQEFADRNKE SVPWKEVLDS CKPSSVVEPK EKCLYELDTN EKLPSSFRSG PTDGQEHCEW 480 LNSDGTNVKN FSLSLPEEVD SFKLSPCSSA MGTHSDYYTS LFEQGQTGTL DSDISLTVAQ 540 KQKFTIREIS PEWGYATEAT KVIIVGSFLC DPSESAWSCM FGDVEVPAQI IQDGVLRCKA 600 PPHLFGKVTI CITSSNRVSC SEVREFEYRV KSSSGTNNSP PTETTKSAEE LLLLVRFVQM 660 LMSDSSMQNR DSVEPETLRR LKADDDSWDS IIEALLLGNG SASSNIYWLL EELLKDKLQQ 720 WLSSRSHGLD QTGCSLSKKE QGIIHMVAGL GFEWALNSIL SCGVNINFRD INGWTALHWA 780 ARFGREKMVA VLIASGASAG AVTDPNSQDP IGKTPASIAA ISGNKGLAGY LSEVSLTSHL 840 SSLTLEESEL SKGSAEVEAE ITVNSISNRS LQGNEDQASL KNTLAAVRNS AQAAARIQSA 900 FRAHSFRKRQ QKEAGVSIDD YGISSDDIQG LSAMSKLAFR NPRDYNSAAV SIQKKYRGWK 960 GRKDFLALRQ KVVKIQAHVR GYQLRKHYKV ICWAVGILDK VVLRWRRKGV GLRGFRHETQ 1020 SSEESEDEDI LKVFRKQKVD GAIEEAVSRV LSMVESPEAR QQYHRMLGRY HQAKAELGGT 1080 SGEADVPNSL DDTFNIEDID MYQFP

Sequence ? help Back to Top

Protein Sequence Length: 1105 aa Download sequence

MTKTTLPSTV GRNLVPTYPS IPLLRGICRG CSGLSIILGK YTISGLDIGT HDSRPPKLLQ  60
APSSKLQPYT PRTTGSPVIR FSVVLVDANE HKSNAFSAVR GQVLIFRQSL NMMQSGYNIN  120
DLFQEAQTRW LKPAEVLYIL QNHEKFKLAP EPPQQPSSGS LFLFNKRVLR FFRRDGHHWR  180
KKKDGRTVGE AHERLKVGNA ETLNCYYAHG EDNPNFQRRS YWMLDPAYEH IVLVHYREIS  240
EGKSSTGTFA QSPVSSSSFS PSPSDKTTQN RGSTSMISDL REPYQNLSSP GSIEVNSDVA  300
IKKNGRENPD KLYGTGESDS SAKFDVSQAL RQLEEQLSLN EDSFNEFVDD NPNSDIMDRF  360
NEFLDDTNGS DILEDHSDMT NQDQFTAFHG PEYVVHDQFY GGRAQMQGNA NNSDEHSQFI  420
GQEFADRNKE SVPWKEVLDS CKPSSVVEPK EKCLYELDTN EKLPSSFRSG PTDGQEHCEW  480
LNSDGTNVKN FSLSLPEEVD SFKLSPCSSA MGTHSDYYTS LFEQGQTGTL DSDISLTVAQ  540
KQKFTIREIS PEWGYATEAT KVIIVGSFLC DPSESAWSCM FGDVEVPAQI IQDGVLRCKA  600
PPHLFGKVTI CITSSNRVSC SEVREFEYRV KSSSGTNNSP PTETTKSAEE LLLLVRFVQM  660
LMSDSSMQNR DSVEPETLRR LKADDDSWDS IIEALLLGNG SASSNIYWLL EELLKDKLQQ  720
WLSSRSHGLD QTGCSLSKKE QGIIHMVAGL GFEWALNSIL SCGVNINFRD INGWTALHWA  780
ARFGREKMVA VLIASGASAG AVTDPNSQDP IGKTPASIAA ISGNKGLAGY LSEVSLTSHL  840
SSLTLEESEL SKGSAEVEAE ITVNSISNRS LQGNEDQASL KNTLAAVRNS AQAAARIQSA  900
FRAHSFRKRQ QKEAGVSIDD YGISSDDIQG LSAMSKLAFR NPRDYNSAAV SIQKKYRGWK  960
GRKDFLALRQ KVVKIQAHVR GYQLRKHYKV ICWAVGILDK VVLRWRRKGV GLRGFRHETQ  1020
SSEESEDEDI LKVFRKQKVD GAIEEAVSRV LSMVESPEAR QQYHRMLGRY HQAKAELGGT  1080
SGEADVPNSL DDTFNIEDID MYQFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein