PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g782280.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 494aa    MW: 53919.6 Da    PI: 9.4863
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g782280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP129.81e-40185261278
                       -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       CqvegC+ dls+ak+yhr+h++C  hsk+p+v+v+g+e+rfCqqCsrfh lsefDe+krsCrrrL++hn+rrrk+q+
  Pd.00g782280.m01 185 CQVEGCNIDLSSAKDYHRKHRICANHSKSPKVVVEGVERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPQT 261
                       **************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    
MNSVLLMEWN EKPPSLWDLE NLFMFGAKVT DNSKKLQPAD WGIEGERGMN SESFYSTGVD  60
GGSGVSGSDL GDGSSKSSKS ASINSSVGES KKPNFSLDAF EGFPNDFIHK NESAKVEALG  120
SSPTHEVSAG SGEPLLSLKL GKRMYFEDVC AGNNPKSSSL SVISSSMPKT KRSKSTGQSA  180
FAPHCQVEGC NIDLSSAKDY HRKHRICANH SKSPKVVVEG VERRFCQQCS RFHGLSEFDE  240
KKRSCRRRLS DHNARRRKPQ TEALRNPTRL SSSLFNERQQ MGLVLDQAPS VYTRHPSNLT  300
WDGACSFKFG QTKEYFPKPA KGGGTGGQLN LANNGIPSSI TMLYHDSSRQ SPSKGTAAEV  360
LNRGAEESMI SFNLGATQDF HRALSLLSTS SWVSGEAKPV ALDNNTNQNY QNNIPQPGMQ  420
AMTQGLPVSS EIFIGSKGLM SLVIKPTNSI KFDPKDSSFF HINVTLIKEL STALVLQPTR  480
FQILRCVVAN SRAV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241258KKRSCRRRLSDHNARRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.13e-75SBP family protein