PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g780170.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 375aa MW: 41339.5 Da PI: 7.0687 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 101.1 | 1.9e-31 | 55 | 195 | 2 | 132 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg.... 88 g+kdrhsk++T +g+RdRRvRls+++a++++dLq++LG+ ++sk ++WLl +ak++i+el+ ++ +++ ++ ++ s + ++s+ ++ Pd.00g780170.m01 55 FGGKDRHSKVCTVKGLRDRRVRLSVPTAIQLYDLQERLGLNQPSKVVDWLLDAAKHEIDELPPLPLPPSGNFglNHPSLVLTSSHGVQThaha 147 689*************************************************************77777444332222222222111112112 PP TCP 89 ..............................kaaksaakskksqksaasalnlakesrakarararertrekmri 132 + k+++ ar+ t+e+ Pd.00g780170.m01 148 qlshdngegpsggiaparshfwstnsdaiwR--------------------------GKSKEIARDTTNEEEEE 195 2222222222333333332332222222220..........................33333344433333332 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MIKSPNEADL QEAAGNSSRD DQANKFSTKA NDLSRPSTPW LRLKDPRIVR VSRAFGGKDR 60 HSKVCTVKGL RDRRVRLSVP TAIQLYDLQE RLGLNQPSKV VDWLLDAAKH EIDELPPLPL 120 PPSGNFGLNH PSLVLTSSHG VQTHAHAQLS HDNGEGPSGG IAPARSHFWS TNSDAIWRGK 180 SKEIARDTTN EEEEENQKDI STGSDQKEEG TVDGNSSSNN FLTRISTNHP FFPGLVNNAM 240 PYAYHNWDHN QPSNFPLSQL GSHGFPSQTA DLHNFINVSL PSTLSLSTTQ SYFPSHNAAA 300 AAEIDPRQFN HMHMLSSSST SQNLLPNSLS PTLYPNSQTL RTPHLSMMTK LVRSSNNTTG 360 SDHHQPNTDQ ESPSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02150.1 | 4e-43 | TCP family protein |