PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g778420.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 202aa MW: 23201.8 Da PI: 8.2757 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 42.6 | 1e-13 | 4 | 36 | 24 | 56 |
S--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 24 ypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ e++ +LAk lgL+ rq+ +WFqNrRa++k Pd.00g778420.m01 4 KLEPERKMQLAKALGLQPRQIAIWFQNRRARWK 36 6788999*************************9 PP | |||||||
2 | HD-ZIP_I/II | 105.3 | 4.7e-34 | 3 | 72 | 22 | 91 |
HD-ZIP_I/II 22 ekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kLeperK++la++Lglqprq+a+WFqnrRAR+ktkqlEkdy++Lk+++dalk++n+ L++++++L++el Pd.00g778420.m01 3 NKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKKKFDALKADNDVLQDHNNKLQAEL 72 89*****************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MGNKLEPERK MQLAKALGLQ PRQIAIWFQN RRARWKTKQL EKDYDVLKKK FDALKADNDV 60 LQDHNNKLQA ELLSMKSKDS NEAGLNNINN LKKETDQGSW SNGSENSSDH HHHHLNLDIS 120 RTPATTNSSP SNSQQTNGKN LFPSSLRPTS ITQLLQGSSR SDLQCLKVDQ MIQDESLCSM 180 FNGIDQEQQQ GYWPWPEQHH FH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 31 | 39 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15150.1 | 1e-52 | HD-ZIP family protein |