PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g777140.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 1038aa MW: 113976 Da PI: 5.1716 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57 | 4.4e-18 | 37 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l Pd.00g777140.m01 37 KGQWTPEEDEILQRAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 66.4 | 5e-21 | 89 | 135 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+++++vk++G++ W+tIa++++ gR +kqc++rw+++l Pd.00g777140.m01 89 KGPWSKEEDEIIIELVKKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 135 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 47.1 | 5.5e-15 | 141 | 183 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT++E++ l++a++++G++ W+ + ++ gRt++ +k++w+ Pd.00g777140.m01 141 KEAWTQDEELALIRAHQMYGNK-WAELTKFLP-GRTDNAIKNHWN 183 579*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1038 aa Download sequence |
MEGDRTNSTP SEGLGDSIQK VRALHGRTSG PTRRSTKGQW TPEEDEILQR AVQRFKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII IELVKKYGPK KWSTIAQHLP 120 GRIGKQCRER WHNHLNPGIN KEAWTQDEEL ALIRAHQMYG NKWAELTKFL PGRTDNAIKN 180 HWNSSVKKKL DSYLKSGLLT QFQGLPHVGH QNQSVLSSSS RMQSSGDDSG AKAAEGEEIS 240 ECSQDSTVAG CFLSTTEMTN VVPHPREEFQ INEVSRLGND PSCSPASCSE PYYPSVGDAT 300 FSIPEIPPEM VCSKFIEQNF SHEAGASMSG DFQFNLHELP INSSLECGQE SSRMHTHCVG 360 CNESHEGVNA PFQTSTSMGN MAVGFIKSEH MLISDDECCR VLFSDAMNGG CFSSGDFTNG 420 AHMVDLGACT DSVLLQPSNL QISETGRTSA SQVYHPLSSD VTGTSCSQVV SAHEGPLIYA 480 GEPSHLFRVQ EQEFVTNSND GFIYTNDSAS NDTGMQEQSD LVKDPSKLVP VNTFDSGLDS 540 QNCPVDVRSD ERTEQQDGGA LCYEPPRFPS LDIPFFSCDL VQSGNDMQQE YSPLGIRQLM 600 MSSMNCLTPY RLWDSPSRES SPDAVLKSAA KTFTGTPSIL KKRHRDLLSP LSPLSDRRID 660 KRLGTDLTSS LARDFSRLDV MFEDSEEKTT LLSPSSNKNR NSDSPSEDKE NKGTCESRIE 720 KGTDSTALSD DGIAHKDFDN GESQEKTKQF QGIADIDAKN KVDVVPTSKI AQQTSGVLVE 780 HNANDLLLCS PVGCKAEKAL GTSTRTPRSQ FRKSFEATNP GVPSKSFSAR QCSSVKSPTI 840 CVKKHESYSL VDTCVQSDSL SAPPETTGDN AGNDISIENI FGDTPFKQSI ESPSAWKSPW 900 FINSFVPGPR VDTEISIEDI GFFMSPGDRS YDAIGLMKQI SEQTAAAYAN AQEVLGNDTP 960 ETLFRERRKN QALVDPENNH GPPNQPGSSS LSAANVLVER RTLDFSECGT PGKGTENAKS 1020 SNAKTFSSPS SYLLKGCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.2 | 0.0 | MYB family protein |