PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g771090.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 806aa MW: 93535.6 Da PI: 8.0322

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g771090.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.2	1.2e-22	272	358	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y++YA GFs+rk+ +ks+ ng +++r+++C+++g+r ++++ + r++r+etrtgC a++++ ++ +gk++vt++e +HnHe++ Pd.00g771090.m01 272 CYSRYAVLEGFSIRKDFVNKSRINGIVVSRRYTCYRQGYRPIQHNA--NVRKSRQETRTGCLAHMTIARQPNGKFCVTHFEPKHNHEFV 358 7***************************************9988..9999********************************986 PP
2	FAR1	91.6	1e-28	406	494	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA +vGFsvrk++ ++sk ng++++r+f+C +eg+r+++k++ + +r+r+etr+gC a+l+++++ d++++vt++e++HnHel+ Pd.00g771090.m01 406 EFYNTYAGRVGFSVRKDYVNRSKINGSVVSRRFTCFREGFRQRDKRD-MNVKRPRKETRIGCLAQLVISRQPDDRYRVTHFEEKHNHELV 494 6*****************************************999.99************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 806 aa Download sequence
MKMAMVRTYR VLPDPLNPRP ETRHVNRFDS PPAAGLFTKV TTKPTNHSKF TGKCGKPRCT 60 ECHIHPASKA KVKTKGNHKL KSSDVLSNHR LVTWRVVDSR PSSNFSGWMG CSEPDISSHP 120 QEESDYNELP TSFRLDIDVQ CDCRSSKDSC AERSQAVIDH VHDSPRECQS PKGSSFEKRL 180 VVIDTEQEYQ SPIPSSIDKN QVEIDCEECE TPKFYSVSKF EMDVDGELEL QRPNVPCADV 240 PRAGMAMKGE EYIYVVPQIG VEFESEDHAY NCYSRYAVLE GFSIRKDFVN KSRINGIVVS 300 RRYTCYRQGY RPIQHNANVR KSRQETRTGC LAHMTIARQP NGKFCVTHFE PKHNHEFVAP 360 CTTYLLPSQK RLNFAQAVEA NLGDKSGIYG VPKLGMGFNS EDHAYEFYNT YAGRVGFSVR 420 KDYVNRSKIN GSVVSRRFTC FREGFRQRDK RDMNVKRPRK ETRIGCLAQL VISRQPDDRY 480 RVTHFEEKHN HELVAACRVH MLRSQKRLIA AQVFEGDLVD CSNLQPESAS DCLFYHEDEE 540 DFINAWKVLL DVYGLWENEW LHEMFEYREK WATAYGRHIF CADIKAVLLH ESFTENLRKY 600 LKSDSDVLLL CKHLGKVIND WHYKELEGNY NMHHHLPELM GDVILLKHAR DMYTPMIFEL 660 FQQEYETCLN IIVNQCTQTE PLFEYKVSIY GQPREYMVTF DSSTETVACN CMKFEFMGVL 720 CSHALKVLDY RNIKILPSKY ILKRWSKDAR LTTVYCTIIL RLGVHSNYEM LKPFSKWKFH 780 SLPQLLHFVE QFLVQKLGFL SLGYPS

Sequence ? help Back to Top

Protein Sequence Length: 806 aa Download sequence

MKMAMVRTYR VLPDPLNPRP ETRHVNRFDS PPAAGLFTKV TTKPTNHSKF TGKCGKPRCT  60
ECHIHPASKA KVKTKGNHKL KSSDVLSNHR LVTWRVVDSR PSSNFSGWMG CSEPDISSHP  120
QEESDYNELP TSFRLDIDVQ CDCRSSKDSC AERSQAVIDH VHDSPRECQS PKGSSFEKRL  180
VVIDTEQEYQ SPIPSSIDKN QVEIDCEECE TPKFYSVSKF EMDVDGELEL QRPNVPCADV  240
PRAGMAMKGE EYIYVVPQIG VEFESEDHAY NCYSRYAVLE GFSIRKDFVN KSRINGIVVS  300
RRYTCYRQGY RPIQHNANVR KSRQETRTGC LAHMTIARQP NGKFCVTHFE PKHNHEFVAP  360
CTTYLLPSQK RLNFAQAVEA NLGDKSGIYG VPKLGMGFNS EDHAYEFYNT YAGRVGFSVR  420
KDYVNRSKIN GSVVSRRFTC FREGFRQRDK RDMNVKRPRK ETRIGCLAQL VISRQPDDRY  480
RVTHFEEKHN HELVAACRVH MLRSQKRLIA AQVFEGDLVD CSNLQPESAS DCLFYHEDEE  540
DFINAWKVLL DVYGLWENEW LHEMFEYREK WATAYGRHIF CADIKAVLLH ESFTENLRKY  600
LKSDSDVLLL CKHLGKVIND WHYKELEGNY NMHHHLPELM GDVILLKHAR DMYTPMIFEL  660
FQQEYETCLN IIVNQCTQTE PLFEYKVSIY GQPREYMVTF DSSTETVACN CMKFEFMGVL  720
CSHALKVLDY RNIKILPSKY ILKRWSKDAR LTTVYCTIIL RLGVHSNYEM LKPFSKWKFH  780
SLPQLLHFVE QFLVQKLGFL SLGYPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-29	FAR1 family protein