PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g771080.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 397aa    MW: 45363.6 Da    PI: 6.0278
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g771080.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.73.3e-07305343240
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40 
                       +Y++YA   GFs+rk+  +ks+ ng +++r+++C+ e  
  Pd.00g771080.m01 305 CYSRYAVLEGFSIRKDFVNKSRINGIVVSRRYTCQLEFP 343
                       7*********************************98755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MKSEGRQHGM FRPYRVLPDP LNLRPGNRQV NKFDSLSTAG LFTKPTNHSK FTGKCGKPRC  60
TECQIHPASK AKDKTKGNHK LKSSDVLSNH RLVKFSGLDI DVHPQEESDY NELPTSFRLD  120
IDVQRDCRSS KDSSDFFVFP SFFSSLPNEG GWVVVSLIYQ VIHKKSDYNE LPTSFRLDID  180
VHPQEESDYN ELPTSFRLDI DVQRDCQSSK DSSAERSQAV IDHEHDSLRE CQSPKGSSFE  240
KRQVVIDTEQ ECQSPIPSSI DKNQSPNVPC ADVPGAGMAM KGEEYIYVVP QVGVEFESED  300
HLYNCYSRYA VLEGFSIRKD FVNKSRINGI VVSRRYTCQL EFPEEKLDSS FCDSHQIYSP  360
GGHELPAKEH RWIQSRFLGE LLWTYREDTA VLDIYIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-06FAR1 family protein