PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g765620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 179aa    MW: 20392.2 Da    PI: 8.6932
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g765620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.31.7e-2555141190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn+YAke+ Fsvr+++s+k+k+++ei ++++vCskeg +++   +   ++r+r  tr gCkakl v k+k+g+++v+ +++ HnH+l+
  Pd.00g765620.m01  55 EFYNNYAKEADFSVRINSSRKNKETNEILRKEYVCSKEGVPAKGVGE---KKRRRGITREGCKAKLAVVKSKSGTYVVSLFVEGHNHPLT 141
                       6*****************************************98877...9999**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MDYMAEELDG HSEGVGQYRL NSDSDSCDKI YIPQLRDDHK PKSGQGFESL DDAHEFYNNY  60
AKEADFSVRI NSSRKNKETN EILRKEYVCS KEGVPAKGVG EKKRRRGITR EGCKAKLAVV  120
KSKSGTYVVS LFVEGHNHPL TSPKRVHLLR LKITWKYKCE LHTTVMNMGH LALESILCE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-22FAR1 family protein