PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g764480.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 370aa MW: 41736.8 Da PI: 4.7241 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.8 | 1.2e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd llvd+++++G+g+W+ ++ g+ R++k+c++rw +yl Pd.00g764480.m01 14 KGPWTTEEDALLVDYIQKHGTGNWRNLPKNAGLERCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.4 | 2.8e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ Pd.00g764480.m01 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 370 aa Download sequence |
MGRAPCCDKN GLKKGPWTTE EDALLVDYIQ KHGTGNWRNL PKNAGLERCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLKMG 120 IDPVTHAPRI DLLDLSSILS SYMCNNPAAA LLNLSSLLSS STQQQQPLVN PELLRLATNL 180 LSIKQENPEL CSQNYNLLDQ DQLCNSQQQN SQVLPPLQSH DQLQDLIQED FSADVAKMKQ 240 LMQVINEEGY SPNMTNFNCP TVSQENMIPS NLGADHQTAV CQPSYVPCTT SSDPTIIPDL 300 PENYFQSLNY NRSSDFSFDS VMSTPYSSPT ALNSSGTYIN SSTEDEKESY CSDWLKFEIP 360 ESALDINDIM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 9e-98 | MYB family protein |