PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g761330.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 248aa MW: 28384.6 Da PI: 10.096 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 47.4 | 3.6e-15 | 55 | 102 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h ++ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ Pd.00g761330.m01 55 ANHVMAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 102 5899***********************8.....8*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MLVPIEGTSQ WLLKYILFSV PFLHTKYRDE NSPKSHEGDA STRLRKGTPQ DELSANHVMA 60 ERRRREKLNE RFIILRSLVP FVTKMDKASI LGDTIEYVKQ LRKKIQDLEA RNVQMEDDQR 120 SRSSGEIHRS NSMKELRSGL TVVERTRVGP PGSDKRKLRI VEGSGEVSII ESDGLLELQC 180 PYREGLLLDI MQTLRELRIE TTVVQSSLNN GFFVAELRAK VKENVNGKKI SITEVKRVIN 240 QIIPQSDS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 61 | 66 | ERRRRE |
2 | 62 | 67 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09820.1 | 9e-57 | bHLH family protein |