PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g760560.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 293aa MW: 33607.6 Da PI: 10.0617 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 114 | 9.7e-36 | 44 | 135 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k++++++d+++++++sws+ g sfvv+d+++f ++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll Pd.00g760560.m01 44 FLTKTFDMVDDPSTNRIVSWSRGGGSFVVWDPHTFVMNLLPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFVRGQKHLL 127 9****************************************************************999.........**************** PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++ikrkk+ Pd.00g760560.m01 128 KNIKRKKT 135 ******96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MNYLYPVKEE FPGSSSSQSG PGDPVEMIPP QPMEGLNDTG PPPFLTKTFD MVDDPSTNRI 60 VSWSRGGGSF VVWDPHTFVM NLLPRYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFV 120 RGQKHLLKNI KRKKTPSQPL HAQQALGPCV EVGRFGLDGE IDRLRRDKQV LMMELVKLRQ 180 QQQNTRAYLQ AMEQRLQGIE MKQQQMMAFL ARAMQNPAFM QQLVQQKDKR KELEEAMTKK 240 RRRPIDQGPS GVGGGKSSLK GKGTNFIKCC RHCLDRICAS FYDDLSQDLL RSC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 229 | 243 | KRKELEEAMTKKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22830.1 | 1e-114 | HSF family protein |