PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g755990.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 423aa    MW: 46233.9 Da    PI: 7.6969
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g755990.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.7e-1755104255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  Pd.00g755990.m01  55 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 104
                       59*******.**********93....35999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MEEAFRRLNG FTRSTEPDPI SDPPRKSTTA TPTNKRMLRD TTTTAGTGTG AGAMRYRGVR  60
RRPWGRYAAE IRDPQSKERR WLGTFDTAEE AACAYDCAAR AMRGLKARTN FVYPSSPPHA  120
AVNDHLLPPF SFHKQSQPSV KSRNGYGAGH SSSWPSVTPF TQYPTTNNND AAASPLNMLF  180
FRNFINSSPN PSPVYNQFPY NISGSSSSSS AALVNTASCG QPHETNMSAS TNFSSTGTGL  240
SSSMTVATSV PLIDITTSST KPTTYDDHSD FFAVEPSDSG LLEEVIHRFF PKPTSKKSMD  300
PPKSADYGRH NVNNIPSSSS QASFVSANQA PPFDGPTKNH PHQHGGVCYN FEELLPQPQQ  360
LGNSFSVGMD YQPQVSQTTQ AVPFYNDHVP IDVQLGGQDY SMVDNNMFQY PEFMGGFAAR  420
VQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.15e-14ERF family protein