PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g753900.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 481aa MW: 52804.4 Da PI: 8.2308 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.8 | 9.6e-41 | 185 | 261 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+ dls+ak+yhr+h++C hsk+p+v+v+g+e+rfCqqCsrfh lsefDe+krsCrrrL++hn+rrrk+q+ Pd.00g753900.m01 185 CQVEGCNIDLSSAKDYHRKHRICANHSKSPKVVVEGVERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPQT 261 **************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 481 aa Download sequence |
MNSVLLMEWN EKPPSLWDLE NLFMFGAKVT DNSKKLQPAD WGIEGERGIN SESFYSTGVD 60 GGSGVSGSDL GDGSSKSSKS ASISSSVGES KKPNFNLDAF EGFPNDFIHK NESAKAEALG 120 SSPTHEVSAG SGEPLLSLKL GKRMYFEDVC AGNNPKSSSL SVISSSMPKT KRSKSTGQSA 180 FAPHCQVEGC NIDLSSAKDY HRKHRICANH SKSPKVVVEG VERRFCQQCS RFHGLSEFDE 240 KKRSCRRRLS DHNARRRKPQ TEALRNPTRL SSSLFSTDER QQMGLVLDQA PSVYTRHPSN 300 LTWDGACSFK FGQTKEYFPK PAKGGGTGGQ LNLANNGIPS SITMLYHDSS RQSPLKGTAA 360 EVLNRGAEES MISFNLGATQ DFHRALSLLS TSSWVSGEAK PVALDNNTNQ NYQNNIPQPG 420 MQAMTQGLPV SSEYWQTQHL SLNTQEAHVS HSQSNGSNHF HQDLHQFKGP YEFGYQTNEF 480 N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 241 | 258 | KKRSCRRRLSDHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 3e-75 | SBP family protein |