PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g753810.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1045aa MW: 116831 Da PI: 5.6429

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g753810.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.7	6.2e-55	64	178	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e ++rwlk+ e++ iL+n+ek++l+ e++++p+sgsl+L+n++++r+fr+DG++w+kkkdg+tv E+he+LKvg+ e+l+cyYah+e+np+f Pd.00g753810.m01 64 QEaQTRWLKPAEVLYILQNHEKFKLAPEPPQQPSSGSLFLFNKRVLRFFRRDGHHWRKKKDGRTVGEAHERLKVGNAETLNCYYAHGEDNPNF 156 5669*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhyle 116 qrr+yw+L+ ++e+ivlvhy+e Pd.00g753810.m01 157 QRRSYWMLDPAYEHIVLVHYRE 178 ******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1045 aa Download sequence
MLRAPALHSA NNGLTCDPVQ VYLTVSPTRI SSLSEAQLFR GQVLIFRQSL NMMQSGYNIN 60 DLFQEAQTRW LKPAEVLYIL QNHEKFKLAP EPPQQPSSGS LFLFNKRVLR FFRRDGHHWR 120 KKKDGRTVGE AHERLKVGNA ETLNCYYAHG EDNPNFQRRS YWMLDPAYEH IVLVHYREIS 180 EGKSSTGTFA QSPVSSSSFS HSPSDKTTQN RGSTSMISDL REPYQNLSSP GSIEVNSDVA 240 IKKNGRENPD KLYGTGESDS SAKFDVSQAL RQLEEQLSLN EDSFNEFVDD NPNSDIMDRF 300 NEFLDDTNGS DILEDHSDMT NQDQFTAFHG PEYVVHDQFY GGRAQMQGNA NNSDEHSQFI 360 GQEFADRNKE SVPWKEVLDS CKPSSVVEPK EKCLYELDTN EKLPSSFRSG PTDGQEHCEW 420 LNSDGTNVKN FSLSLPEEVD SFKLSPCSSA MGTHSDYYTS LFEQGQTGTL DSDISLTVAQ 480 KQKFTIREIS PEWGYATEAT KVIIVGSFLC DPSESAWSCM FGDVEVPAQI IQDGVLRCKA 540 PPHLFGKVTI CITSSNRVSC SEVREFEYRV KSSSGTNNSP PTETTKSAEE LLLLVRFVQM 600 LMSDSSMQNR DSVEPETLRR LKADDDSWDS IIEALLLGNG SASSNIYWLL EELLKDKLQQ 660 WLSSRSHGLD QTGCSLSKKE QGIIHMVAGL GFEWALNSIL SCGVNINFRD INGWTALHWA 720 ARFGREKMVA VLIASGASAG AVTDPNSQDP IGKTPASIAA ISGHKGLAGY LSEVSLTSHL 780 SSLTLEESEL SKGSAEVEAE ITVNSISNRS LEGNEDQASL KNTLAAVRNS AQAAARIQSA 840 FRAHSFRKRQ QKEAGVSIDD YGISSDDIQG LSAMSKLAFR NPRDYNSAAV SIQKKYRGWK 900 GRKDFLALRQ KVVKIQAHVR GYQLRKHYKV ICWAVGILDK VVLRWRRKGV GLRGFRHETQ 960 SSEESEDEDI LKVFRKQKVD GAIEEAVSRV LSMVESPEAR QQYHRMLERY HQAKAELGGT 1020 SGEADVPNSL DDTFNVEDID MYQFP

Sequence ? help Back to Top

Protein Sequence Length: 1045 aa Download sequence

MLRAPALHSA NNGLTCDPVQ VYLTVSPTRI SSLSEAQLFR GQVLIFRQSL NMMQSGYNIN  60
DLFQEAQTRW LKPAEVLYIL QNHEKFKLAP EPPQQPSSGS LFLFNKRVLR FFRRDGHHWR  120
KKKDGRTVGE AHERLKVGNA ETLNCYYAHG EDNPNFQRRS YWMLDPAYEH IVLVHYREIS  180
EGKSSTGTFA QSPVSSSSFS HSPSDKTTQN RGSTSMISDL REPYQNLSSP GSIEVNSDVA  240
IKKNGRENPD KLYGTGESDS SAKFDVSQAL RQLEEQLSLN EDSFNEFVDD NPNSDIMDRF  300
NEFLDDTNGS DILEDHSDMT NQDQFTAFHG PEYVVHDQFY GGRAQMQGNA NNSDEHSQFI  360
GQEFADRNKE SVPWKEVLDS CKPSSVVEPK EKCLYELDTN EKLPSSFRSG PTDGQEHCEW  420
LNSDGTNVKN FSLSLPEEVD SFKLSPCSSA MGTHSDYYTS LFEQGQTGTL DSDISLTVAQ  480
KQKFTIREIS PEWGYATEAT KVIIVGSFLC DPSESAWSCM FGDVEVPAQI IQDGVLRCKA  540
PPHLFGKVTI CITSSNRVSC SEVREFEYRV KSSSGTNNSP PTETTKSAEE LLLLVRFVQM  600
LMSDSSMQNR DSVEPETLRR LKADDDSWDS IIEALLLGNG SASSNIYWLL EELLKDKLQQ  660
WLSSRSHGLD QTGCSLSKKE QGIIHMVAGL GFEWALNSIL SCGVNINFRD INGWTALHWA  720
ARFGREKMVA VLIASGASAG AVTDPNSQDP IGKTPASIAA ISGHKGLAGY LSEVSLTSHL  780
SSLTLEESEL SKGSAEVEAE ITVNSISNRS LEGNEDQASL KNTLAAVRNS AQAAARIQSA  840
FRAHSFRKRQ QKEAGVSIDD YGISSDDIQG LSAMSKLAFR NPRDYNSAAV SIQKKYRGWK  900
GRKDFLALRQ KVVKIQAHVR GYQLRKHYKV ICWAVGILDK VVLRWRRKGV GLRGFRHETQ  960
SSEESEDEDI LKVFRKQKVD GAIEEAVSRV LSMVESPEAR QQYHRMLERY HQAKAELGGT  1020
SGEADVPNSL DDTFNVEDID MYQFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein