PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g753780.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 315aa    MW: 34483.8 Da    PI: 9.3988
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g753780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP131.52.9e-4141117278
                       -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       C v+gC++dlse+++yhrrhkvCe hsk+++v+++g+eqrfCqqCsrfh+l+efDe+krsCrrrL++hn+rrrk+q 
  Pd.00g753780.m01  41 CLVDGCNSDLSECRDYHRRHKVCELHSKTSKVTIKGQEQRFCQQCSRFHSLEEFDEGKRSCRRRLDGHNKRRRKPQL 117
                       **************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MENGSKGKLK DPGVSMMKSS SSAASLKRPR RTNNGAQIAS CLVDGCNSDL SECRDYHRRH  60
KVCELHSKTS KVTIKGQEQR FCQQCSRFHS LEEFDEGKRS CRRRLDGHNK RRRKPQLEPM  120
STNLGRFLSS YQGTRFLQFG SPQVCPTNAV MNSAWGGAIK AENDVLLHNH SQLSETRRNL  180
FPGSLSCQQS IESMLSQATA CQQLVGTNFA LGNSGNSHKM FANGLYCDVE SNRALSLLSS  240
TPASRGEIGL SHAGQSSSIW PAQPLIPRLR YNVLGMEDNA AISNLVADGS SNANNMPLQG  300
MFQIIYDGST AGAPH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198115KRSCRRRLDGHNKRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.19e-53SBP family protein