PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g753330.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 206aa MW: 22547.7 Da PI: 6.7478 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.9 | 2.1e-09 | 53 | 100 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i ++ L++l+P + ++ + Ka +L + ++Y++ Lq Pd.00g753330.m01 53 SHSLAERARREKISVRMKLLQSLVPGC----DQINGKAHVLDEIIKYVQLLQ 100 8*************************9....9*****************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MVSEEEGERK GKKQRKQNRS EAKKQSKVAA ASAEGVQRDG VRVKARRGEA TDSHSLAERA 60 RREKISVRMK LLQSLVPGCD QINGKAHVLD EIIKYVQLLQ NQVECLAAKL AFVDAMLYDD 120 CELNPSTNPC ASDQRLCCLE PPLPFVLEPP SSVQFRYLAD AAPPGTLASL LLTEDQKASL 180 IPQAQDGGSF EDIGKQPAGL DHSCTF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 1e-32 | bHLH family protein |