PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g752880.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 271aa    MW: 29432.9 Da    PI: 4.7521
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g752880.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-194089255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++ GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  Pd.00g752880.m01 40 RFLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 89
                      678******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDFFNNSSKA NTSPSSSSKT KRKQQNQQTQ QPQQQQQETR FLGVRRRPWG RYAAEIRDPS  60
TKERHWLGTF DTAEEAALAY DRAARSMRGS KARTNFVYSD MPHGSSVTSI ISPDESQHDM  120
SAFFATPLQP QPQTTNHQQS FFTQDPFDAY PYSGGSSGGF GSGSYGPVSG GDEPGSGSGS  180
QSHTELPPLP PCVSSTCYGP DGVMGSDMDM GYFGFSEPPT NNGLDPMMNG SYMGFDSNEF  240
VQHSPLFGSM PPVSDAGIDG FDLGSSSAYF Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.13e-34ERF family protein