PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g751250.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 943aa MW: 103436 Da PI: 4.5381

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g751250.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.3e-12	706	747	8	54
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+++N+++ +Lr+l+P+ + K++Ka+iL A++Y+k+L Pd.00g751250.m01 706 AERKRRKKLNERLYRLRSLVPNiS------KMDKAAILGDAIDYVKDL 747 7*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 943 aa Download sequence
MSRETSESGS DRDSINFGAL DEAWHQLGDR PVVGIGAEEE PSVVEVTSSE DGSEEEQTVV 60 GGQRAEVAQL EVELGTEEEA EDPDLARIDL DGVPVRVSVA RSVGGHRAHT DEGCLCTRTT 120 MTRGSEVDGI SRRRPSSNEP KFAEDDPMYV RALEEAPRDR AEHEHSAVLL RFEEEPEADM 180 VLLFAGSAGK NPGKQPQFAE VVERPLVLRD WVLGSGGGGG EAEGLGGEAG LGSGSGELSE 240 DEEGQLEVIR ALEASARDTT ELLSHSSLSA SGLLDPITEA MGIDKNDPRA WQLLERLLKK 300 GAGASGSGPK GPPPARPARE GAPVAPTPNA EAWSPGRGSS STFFSRAFSR GMIIIMQNLT 360 ERLRPLVGLK GWDYCVIWKL SENQRFIELM DCCCSGADEN TQTNGGQELL FPVYPVLPCR 420 DTMQHSRTNS CDVLAQLPSS LSLDSGIYAH PLISNQPIWL NSSSNRDSSA MAERDGTRVL 480 VPSAGGLIEL FVSKDVSEDQ QVIDYITAQC NISKEQDTLL GAGCNTSFPV NINDMSTEIQ 540 PHVFPGNENE GNDHLNSNHF QQPPVVSPSV DHDSNVPYDI SVDRICLCSA SPMNFLQHVT 600 YNSENSMKNG NSNVYYEQRS HESLGGMGLQ ADADTSNMHN SMHVMEALEN MEQQGVEDQD 660 SVKHEAQGGR TADNSGSDCS DQIDDEDDTK YRRRTGKGPQ SKNLFAERKR RKKLNERLYR 720 LRSLVPNISK MDKAAILGDA IDYVKDLLRQ VKELQDELEQ HSNDEGPNTK TSANICGNHN 780 NFQPEILNQN GTSITNEPEN DDKPPNGFHP QVGVTQLDGN ELFVTVFCEH KPGGFVRLME 840 ALDTLGLEVT NANVTSFRSL VSNVLKVEKK DSEVVQADDV RDSLLEITRN PSSKVWPEMA 900 KAKASENGSG LDHFHHDDQH HYQQHHLHNY HASSYHLQHL YNY

Sequence ? help Back to Top

Protein Sequence Length: 943 aa Download sequence

MSRETSESGS DRDSINFGAL DEAWHQLGDR PVVGIGAEEE PSVVEVTSSE DGSEEEQTVV  60
GGQRAEVAQL EVELGTEEEA EDPDLARIDL DGVPVRVSVA RSVGGHRAHT DEGCLCTRTT  120
MTRGSEVDGI SRRRPSSNEP KFAEDDPMYV RALEEAPRDR AEHEHSAVLL RFEEEPEADM  180
VLLFAGSAGK NPGKQPQFAE VVERPLVLRD WVLGSGGGGG EAEGLGGEAG LGSGSGELSE  240
DEEGQLEVIR ALEASARDTT ELLSHSSLSA SGLLDPITEA MGIDKNDPRA WQLLERLLKK  300
GAGASGSGPK GPPPARPARE GAPVAPTPNA EAWSPGRGSS STFFSRAFSR GMIIIMQNLT  360
ERLRPLVGLK GWDYCVIWKL SENQRFIELM DCCCSGADEN TQTNGGQELL FPVYPVLPCR  420
DTMQHSRTNS CDVLAQLPSS LSLDSGIYAH PLISNQPIWL NSSSNRDSSA MAERDGTRVL  480
VPSAGGLIEL FVSKDVSEDQ QVIDYITAQC NISKEQDTLL GAGCNTSFPV NINDMSTEIQ  540
PHVFPGNENE GNDHLNSNHF QQPPVVSPSV DHDSNVPYDI SVDRICLCSA SPMNFLQHVT  600
YNSENSMKNG NSNVYYEQRS HESLGGMGLQ ADADTSNMHN SMHVMEALEN MEQQGVEDQD  660
SVKHEAQGGR TADNSGSDCS DQIDDEDDTK YRRRTGKGPQ SKNLFAERKR RKKLNERLYR  720
LRSLVPNISK MDKAAILGDA IDYVKDLLRQ VKELQDELEQ HSNDEGPNTK TSANICGNHN  780
NFQPEILNQN GTSITNEPEN DDKPPNGFHP QVGVTQLDGN ELFVTVFCEH KPGGFVRLME  840
ALDTLGLEVT NANVTSFRSL VSNVLKVEKK DSEVVQADDV RDSLLEITRN PSSKVWPEMA  900
KAKASENGSG LDHFHHDDQH HYQQHHLHNY HASSYHLQHL YNY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	692	713	RRRTGKGPQSKNLFAERKRRKK
2	707	714	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-103	bHLH family protein