PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g750520.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 260aa MW: 29331.5 Da PI: 8.0371 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.7 | 2e-08 | 107 | 150 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + ErrRR r+++++ r l+P+ +K++Ka+i+ A +Y+++Lq Pd.00g750520.m01 107 ISERRRRGRMKEKLYAWRALVPNI-----TKMDKASIVGDALQYMQELQ 150 57*********************7.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MDGANFDQFF NLIRENDQNP VVDRFDCDHD NNHFITNGCL IDNQFGPTTP GDMFGFNINS 60 LLPSFEGEKK EVPEEDINGR DDSSGTSMTT TTTTKRVKNI DKSRTLISER RRRGRMKEKL 120 YAWRALVPNI TKMDKASIVG DALQYMQELQ MQAKKLKSEI AGLEASLVGP PQRYQGYNNI 180 GNTGRIRMAN TSLLVSKKII QNSNLTAASE SLVLTVTLKL KISGLYVKLN QVKECEQEIN 240 LPNLKLWVIW ALLSEGLELI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28160.1 | 3e-52 | bHLH family protein |