PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g748960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 183aa MW: 20657.1 Da PI: 6.3018 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 112.2 | 7.5e-35 | 58 | 147 | 2 | 77 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............ssssaseceaes 77 + kkdrhski T++g+RdRRvRls+++a++fFdLqd LGfdk+skt+eWLl+++ +aik+l s +s+sec++++ Pd.00g748960.m01 58 PMKKDRHSKIFTAQGLRDRRVRLSINVARQFFDLQDLLGFDKASKTLEWLLTKSRRAIKQLGTRnkhltcststgpskSLTSSSECDDDD 147 679**********************************************************88878888877555544334445552222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MAPPLPQSLT HLGVSSNTVP PSINADDHHP YHNYYGAINN DNIFPHFLHS SREDIAPPMK 60 KDRHSKIFTA QGLRDRRVRL SINVARQFFD LQDLLGFDKA SKTLEWLLTK SRRAIKQLGT 120 RNKHLTCSTS TGPSKSLTSS SECDDDDVDL DTNEVENVAS REKEIYIEPP DPLCFTVGQE 180 LQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67260.2 | 2e-30 | TCP family protein |