PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g748040.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 33535.3 Da PI: 7.6436 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.3 | 8.8e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd llvd+++++G+g+W+ ++ g+ R++k+c++rw +yl Pd.00g748040.m01 14 KGPWTTEEDALLVDYIQKHGTGNWRNLPKNAGLERCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.7 | 1.7e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k+ w+++ Pd.00g748040.m01 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNCWNTH 111 89********************.*********.***********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MGRAPCCDKN GLKKGPWTTE EDALLVDYIQ KHGTGNWRNL PKNAGLERCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNCWNT HIRKRLLKMG 120 IDPVTHAPRI DLLDLSSILS SYMCNNPAAA LLNLSSLLSS TQQQQPLVNP EMLRLATNLL 180 SIKQENPELC SQNYNLHDQN QLCNSQQQNS QVLPPLQSHD QLQDLIQEDF SADVAKMKQL 240 MQVINEEGYS PNMTNFNCPT VSQENMIPSN LGADHQTAVC QPSYVPCTSV LKLVKIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 2e-88 | MYB family protein |