PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g747150.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 74aa MW: 8530.15 Da PI: 4.1953 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.9 | 3.2e-10 | 25 | 67 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ ++++E+ l+ + +++ G + W++Ia +++ gR+++++ +w Pd.00g747150.m01 25 KLHFSEDEETLITRMFNLVGER-WSLIAGRIP-GRSAEEIEKYWT 67 5789******************.*********.***********5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 74 aa Download sequence |
MADLDHSTSD DNSVDSREES SQDSKLHFSE DEETLITRMF NLVGERWSLI AGRIPGRSAE 60 EIEKYWTSRY STSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46410.1 | 5e-18 | MYB_related family protein |