PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g746550.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 471aa MW: 53084.6 Da PI: 8.0175

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g746550.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.6	1.7e-11	296	342	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g746550.m01 296 NHVEAERQRREKLNHRFYLLRSVVPNV-----SKMDRSSLLADAVAYINQLK 342 799*********************6.....5***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MEAIISSCSS PNFCQENLGT FQRLQFIFQN RPEWWVYSIF WQPSKDSNDQ VSLSWAAGDF 60 RVNSDLASKR NNKVTNNHQP KFGFNKKVTR REAEEALFDE DMVDLEMRLV DDGDVTGSEW 120 FYFYSVSLTQ SFAAGHATNN ILGRAFCSGG FVWLAGAHEL QFYECERVKE ARMHGIQTLV 180 CIATPYGVLE LASLDVIKED WGFVHLSKSL FGSDNNNNNR VSQQKGGREG NVLAPLLENG 240 IFSGSQKKLT RQGGSSPESL SGSVGNFTCE NTENTRSKKR RRSSNNGASR ESSLLNHVEA 300 ERQRREKLNH RFYLLRSVVP NVSKMDRSSL LADAVAYINQ LKAKVEELEL KTQAQPQNPK 360 RVSVNNLDNQ CSQSTSSIVD HHSSYNNTKV VPVEVDVKIM GSEAIIRVQC PDQDYPYARL 420 MNALKGLGLQ VYHASISSVK ELMIQDVVAR VPYGFTSEEA MRIGIIKRWH N

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MEAIISSCSS PNFCQENLGT FQRLQFIFQN RPEWWVYSIF WQPSKDSNDQ VSLSWAAGDF  60
RVNSDLASKR NNKVTNNHQP KFGFNKKVTR REAEEALFDE DMVDLEMRLV DDGDVTGSEW  120
FYFYSVSLTQ SFAAGHATNN ILGRAFCSGG FVWLAGAHEL QFYECERVKE ARMHGIQTLV  180
CIATPYGVLE LASLDVIKED WGFVHLSKSL FGSDNNNNNR VSQQKGGREG NVLAPLLENG  240
IFSGSQKKLT RQGGSSPESL SGSVGNFTCE NTENTRSKKR RRSSNNGASR ESSLLNHVEA  300
ERQRREKLNH RFYLLRSVVP NVSKMDRSSL LADAVAYINQ LKAKVEELEL KTQAQPQNPK  360
RVSVNNLDNQ CSQSTSSIVD HHSSYNNTKV VPVEVDVKIM GSEAIIRVQC PDQDYPYARL  420
MNALKGLGLQ VYHASISSVK ELMIQDVVAR VPYGFTSEEA MRIGIIKRWH N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	1e-59	bHLH family protein