PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g746020.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NF-YB | ||||||||
Protein Properties | Length: 174aa MW: 19651.8 Da PI: 7.0456 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 177.7 | 1.1e-55 | 36 | 131 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 +eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++walatlGf+dy+eplk yl++yrele Pd.00g746020.m01 36 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLKRYLHRYRELE 128 89******************************************************************************************* PP NF-YB 95 gek 97 gek Pd.00g746020.m01 129 GEK 131 *97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MDNNIGNNSS EREGFKYNFT GSSISSDHHQ EDGVIKEQDR LLPIANVGRI MKQILPPNAK 60 ISKEAKETMQ ECVSEFISFV TGEASDKCHK EKRKTVNGDD ICWALATLGF DDYAEPLKRY 120 LHRYRELEGE KAAHQGKANS SEERNEVSPP RTSTSSPLKF NVLERGNSSL SRRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 1e-68 | NF-YB family protein |